pZac2.1 gfaABC1D-Cx43-BioID2-BioID2-HA

176743 Mus musculus Bacterial Expression

Plasmid Information

Purpose
Expresses Connexin-43 fused with BioID2 at the C-terminus in astrocytes
Depositor
Baljit Khakh
Article
Soto et al Nature. 2023 Apr;616(7958):764-773. doi:
Insert
Cx43-BioID2-BioID2-HA
Tags
HA
Promoter
gfaABC1D
Available Since
April 11, 2023
Availability
Available

Sequence Information

Length
7,787 bp
Topology
circular
Molecule Type
other DNA

Features

CDS 5
Label Gene Product Position Strand
BioID2 — promiscuous R40G mutant of a biotin pro… 2617..3316 Fwd
DNA Sequence
ATGTTCAAAAATCTTATTTGGCTGAAGGAAGTTGATAGCACCCAGGAGCGGCTTAAGGAATGGAATGTCTCCTATGGCACTGCACTCGTCGCCGATAGACAGACCAAAGGTAGAGGCGGTCTCGGACGGAAGTGGTTGAGTCAGGAGGGCGGTCTTTACTTCTCTTTCTTGTTGAATCCAAAAGAGTTTGAAAATTTGTTGCAACTTCCACTGGTCTTGGGACTCTCCGTGAGCGAGGCACTCGAAGAGATTACAGAGATACCATTTAGTCTGAAGTGGCCCAACGACGTTTATTTTCAGGAGAAAAAGGTTTCAGGGGTCCTTTGTGAGCTCAGTAAGGACAAGCTGATAGTGGGAATCGGTATAAACGTGAATCAAAGAGAGATCCCTGAAGAGATCAAGGATCGGGCCACAACACTTTATGAAATCACTGGAAAGGATTGGGACAGAAAGGAGGTCTTGCTGAAGGTTCTCAAGCGAATTTCCGAAAATCTCAAGAAATTTAAGGAAAAATCCTTTAAAGAGTTCAAAGGAAAAATTGAGTCAAAGATGTTGTACCTTGGAGAGGAGGTTAAACTCTTGGGAGAAGGCAAGATTACCGGGAAACTTGTGGGCCTGAGTGAAAAGGGCGGTGCTTTGATACTTACAGAGGAAGGCATAAAGGAGATACTGTCCGGCGAATTTAGCTTGCGACGGTCA
Protein Sequence
MFKNLIWLKEVDSTQERLKEWNVSYGTALVADRQTKGRGGLGRKWLSQEGGLYFSFLLNPKEFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLCELSKDKLIVGIGINVNQREIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKLLGEGKITGKLVGLSEKGGALILTEEGIKEILSGEFSLRRS
BioID2 — promiscuous R40G mutant of a biotin pro… 3400..4099 Fwd
DNA Sequence
ATGTTCAAAAATCTTATTTGGCTGAAGGAAGTTGATAGCACCCAGGAGCGGCTTAAGGAATGGAATGTCTCCTATGGCACTGCACTCGTCGCCGATAGACAGACCAAAGGTAGAGGCGGTCTCGGACGGAAGTGGTTGAGTCAGGAGGGCGGTCTTTACTTCTCTTTCTTGTTGAATCCAAAAGAGTTTGAAAATTTGTTGCAACTTCCACTGGTCTTGGGACTCTCCGTGAGCGAGGCACTCGAAGAGATTACAGAGATACCATTTAGTCTGAAGTGGCCCAACGACGTTTATTTTCAGGAGAAAAAGGTTTCAGGGGTCCTTTGTGAGCTCAGTAAGGACAAGCTGATAGTGGGAATCGGTATAAACGTGAATCAAAGAGAGATCCCTGAAGAGATCAAGGATCGGGCCACAACACTTTATGAAATCACTGGAAAGGATTGGGACAGAAAGGAGGTCTTGCTGAAGGTTCTCAAGCGAATTTCCGAAAATCTCAAGAAATTTAAGGAAAAATCCTTTAAAGAGTTCAAAGGAAAAATTGAGTCAAAGATGTTGTACCTTGGAGAGGAGGTTAAACTCTTGGGAGAAGGCAAGATTACCGGGAAACTTGTGGGCCTGAGTGAAAAGGGCGGTGCTTTGATACTTACAGAGGAAGGCATAAAGGAGATACTGTCCGGCGAATTTAGCTTGCGACGGTCA
Protein Sequence
MFKNLIWLKEVDSTQERLKEWNVSYGTALVADRQTKGRGGLGRKWLSQEGGLYFSFLLNPKEFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLCELSKDKLIVGIGINVNQREIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKLLGEGKITGKLVGLSEKGGALILTEEGIKEILSGEFSLRRS
HA — HA (human influenza hemagglutinin) epit… 4108..4135 Fwd
DNA Sequence
TACCCTTACGATGTACCGGATTACGCA
Protein Sequence
YPYDVPDYA
Factor Xa site — Factor Xa recognition and cleavage site 4630..4642 Rev
DNA Sequence
ATTGAGGGCCGA
Protein Sequence
IEGR
AmpR bla beta-lactamase 5986..6847 Fwd
DNA Sequence
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
Protein Sequence
MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
intron 1
Label Gene Product Position Strand
chimeric intron — — 1238..1371 Fwd
DNA Sequence
GTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAAACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTACTGACATCCACTTTGCCTTTCTCTCCACAG
misc_feature 1
Label Gene Product Position Strand
WPRE — — 4159..4748 Fwd
DNA Sequence
AATCAACCTCTGGATTACAAAATTTGTGAAAGATTGACTGGTATTCTTAACTATGTTGCTCCTTTTACGCTATGTGGATACGCTGCTTTAATGCCTTTGTATCATGCTATTGCTTCCCGTATGGCTTTCATTTTCTCCTCCTTGTATAAATCCTGGTTGCTGTCTCTTTATGAGGAGTTGTGGCCCGTTGTCAGGCAACGTGGCGTGGTGTGCACTGTGTTTGCTGACGCAACCCCCACTGGTTGGGGCATTGCCACCACCTGTCAGCTCCTTTCCGGGACTTTCGCTTTCCCCCTCCCTATTGCCACGGCGGAACTCATCGCCGCCTGCCTTGCCCGCTGCTGGACAGGGGCTCGGCTGTTGGGCACTGACAATTCCGTGGTGTTGTCGGGGAAATCATCGTCCTTTCCTTGGCTGCTCGCCTATGTTGCCACCTGGATTCTGCGCGGGACGTCCTTCTGCTACGTCCCTTCGGCCCTCAATCCAGCGGACCTTCCTTCCCGCGGCCTGCTGCCGGCTCTGCGGCCTCTTCCGCGTCTTCGCCTTCGCCCTCAGACGAGTCGGATCTCCCTTTGGGCCGCCTCCCCGC
polyA_signal 1
Label Gene Product Position Strand
SV40 poly(A) signal — — 4811..4933 Fwd
DNA Sequence
TAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
promoter 3
Label Gene Product Position Strand
lac promoter — — 142..173 Fwd
DNA Sequence
TTTACACTTTATGCTTCCGGCTCGTATGTTG
T7 promoter — — 1415..1434 Fwd
DNA Sequence
TAATACGACTCACTATAGG
AmpR promoter bla — 5881..5986 Fwd
DNA Sequence
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
protein_bind 2
Label Gene Product Position Strand
CAP binding site — — 106..128 Fwd
DNA Sequence
TAATGTGAGTTAGCTCACTCAT
lac operator — — 180..197 Fwd
DNA Sequence
TTGTGAGCGGATAACAA
rep_origin 2
Label Gene Product Position Strand
f1 ori — — 5400..5856 Fwd
DNA Sequence
ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAACGCTTACAATTT
ori — — 7017..7606 Fwd
DNA Sequence
TTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTTCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAA